New paper on advances in amino acid nitrogen isotopic analysis (Ohkouchi et al., Organic Geochemsitry)

Advances in the application of amino acid nitrogen isotopic analysis in ecological and biogeochemical studies

Naohiko Ohkouchi1,*, Yoshito Chikaraishi1,13, Hilary G. Close2, Brian Fry3, Thomas Larsen4, Daniel J. Madigan5, Matthew D. McCarthy6, Kelton W. McMahon7, Toshi Nagata8, Yuichi I. Naito1,14, Nanako O. Ogawa1, Brian N. Popp9, Shawn Steffan10,11, Yoshinori Takano1, Ichiro Tayasu12, Alex S.J. Wyatt8, Yasuhiko T. Yamaguchi8,15, Yusuke Yokoyama8

1 Department of Biogeochemistry, Japan Agency for Marine-Earth Science and Technology, Japan; 2 Rosenstiel School of Marine and Atmospheric Science, University of Miami, USA3 Australian Rivers Institute, Griffith University, Australia; 4 Leibniz-Laboratory, University of Kiel, Germany; 5 Harvard University Center for the Environment, USA; 6 Department of Ocean Sciences, University of California, Santa Cruz, USA; 7 Graduate School of Oceanography, University of Rhode Island, USA; 8 Atmosphere and Ocean Research Institute, The University of Tokyo, Japan; 9 Department of Geology and Geophysics, University of Hawaii, USA; 10 US Department of Agriculture, Agricultural Research Service, USA; 11 Department of Entomology, University of Wisconsin-Madison, USA; 12 Research Institute of Humanity and Nature, Japan; 13 Present address: Institute of Low Temperature Science, Hokkaido University, Japan; 14 Present address: Nagoya University Museum, Japan; 15 Present address: Lake Biwa Environmental Research Institute, Japan

Compound-specific isotopic analysis of amino acids (CSIA-AA) has emerged in the last decade as a powerful approach for tracing the origins and fate of nitrogen in ecological and biogeochemical studies. This approach is based on the empirical observation that source amino acids (AAs) (i.e., phenylalanine), fractionate 15N very little (< 0.5‰) during trophic transfer, whereas trophic AAs (i.e., glutamic acid), are greatly (∼6–8‰) enriched in 15N during each trophic step. The differential fractionation of these two AA groups can provide a valuable estimate of consumer trophic position that is internally indexed to the baseline δ15N value of the integrated food web. In this paper, we critically review the analytical methods for determining the nitrogen isotopic composition of AAs by gas chromatography–isotope-ratio mass spectrometry. We also discuss methodological considerations for accurate trophic position assessment of organisms using CSIA-AA. We then discuss the advantages and challenges of the CSIA-AA approach using published case studies across a range of topics, including trophic position assessment in various ecosystems, reconstruction of ancient human diets, reconstruction of animal migration and environmental variability, and assessment of marine organic matter dynamics with new classification of microbial fractionation patterns. It is clear that the CSIA-AA approach can provide unique insight into the sources, cycling, and trophic modification of organic nitrogen as it flows through systems. However, this approach will be greatly improved through continued exploration into how biochemical, physiological, and ecological mechanisms affect isotopic fractionation of individual AAs. We end this review with a perspective on future work that will promote the evolution of the rapidly growing field of CSIA-AA.

Adding to our isotope axes @ IsoEcol 2016 (Dr Wyatt)

Amino acid and radiocarbon insights from captive whale sharks

Alex S.J. WYATT1*, Rui Matsumoto2, Yoshito Chikaraishi3, Yosuke Miyari1, Yusuke Yokoyama1, Keiichi Sato2, Nao Ohkouchi3, Toshi Nagata1

1Atmosphere and Ocean Research Institute, The University of Tokyo, Kashiwa, Chiba, JAPAN
2Okinawa Churaumi Aquarium, Motobu, Okinawa, JAPAN
3Japan Agency for Marine-Earth Science and Technology, Yokosuka, JAPAN
*Presenting author

Stable isotope analyses (SIA) have the potential to provide novel insights into spatial and temporal patterns in the trophic ecology of poorly understood organisms like whale sharks Rhincodon typus. However, interpreting SIA depends on accurate diet-tissue discrimination factors (DTDF) to quantify diets and trophic positions, with experimental derivations of DTDF rare for such large-bodied organisms. Captive R. typus have provided a unique opportunity to validate a range of SIA, compound-specific isotope analyses (CSIA) and radioisotope approaches in the world’s largest fish and one of three planktivorous sharks. Diet records over the past five years revealed a diet dominated by North Pacific and Antarctic krill, 44% and 49% of weighted diet for Euphausia pacifica and E. superba, respectively. Despite the well-known diet, SIA of fin tissue from three captive R. typus (7.1, 7.2, and 8.4 m in length) proved hard to reconcile, especially for bulk carbon. In contrast, CSIA of amino acid (AA) nitrogen in the sharks’ tissue was relatively stable over time, despite evidence of variation in AA compositions and δ15N-AA of diet components. Tissue radiocarbon further suggested either long turnover in fin tissues (27 months), or the preferential assimilation of the smaller E. pacifica14C of 3 ‰ compared to -112 ‰ for E. superba). Daily-scale analysis of radiocarbon in R. typus faeces may support the preferential assimilation hypothesis, faeces generally being depleted relative to diet. Together, CSIA-AA and radiocarbon analyses add multiple addtional axes to our isotope space and may alleviate some of the complications involved in interpreting bulk SIA in ecological studies.

IsoEcol 2016 to be hosted in Japan

We are please to announce that we will be hosting The 10th International Conference on the Application of Isotopes to Ecological Studies (IsoEcol 2016) in Tokyo, Japan from April 3-8, 2016.

More information will be made available via the conference website: www.isoecol.com/2016

Organizing Committee

  • Alex Wyatt, The University of Tokyo
  • Ichiro Tayasu, Kyoto University
  • Naohiro Yoshida, Tokyo Institute of Technology
  • Naohiko Ohkouchi, JAMSTEC
  • Toshi Nagata, The University of Tokyo